BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B06SP1|AL427720
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1678 0.0
>3x_Contig1706
Length = 16303
Score = 1678 bits (845), Expect = 0.0
Identities = 874/881 (99%), Gaps = 3/881 (0%)
Strand = Plus / Plus
Query: 6 caaaactttttactaagtgtactaagaaacaagatatctcacttgctccgtttccacaaa 65
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2973 caaaacttcttactaagtgtactaagaaacaagatatctcacttgctccgtttccacaaa 3032
Query: 66 atgagaaaatcgataccattcttcaatcatagcagaactccaaaattcaatcgagaaata 125
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3033 atgagaaaaccgataccattcttcaatcatagcagaactccaaaattcaatcgagaaata 3092
Query: 126 atcaatgattcactttaaccaagctccagagtgtagacaaacgttttgaagtatatggat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3093 atcaatgattcactttaaccaagctccagagtgtagacaaacgttttgaagtatatggat 3152
Query: 186 caaatttgatatgaaacgataaamtttgattttttggaaaattcatgttgttctgttgtt 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3153 caaatttgatatgaaacgataaactttgattttttggaaaattcatgttgttctgttgtt 3212
Query: 246 tagttccaagatggatggaataattgtactgttcaaatatagttcctgtgatgtgataaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3213 tagttccaagatggatggaataattgtactgttcaaatatagttcctgtgatgtgataaa 3272
Query: 306 aagttagtgattgggccggaacgttctgtttattagaataatgaaaagtggaatataatt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3273 aagttagtgattgggccggaacgttctgtttattagaataatgaaaagtggaatataatt 3332
Query: 366 cctgttaatagtaagtaccttgattcatatggatggatggaatggtagagagttaaaacg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3333 cctgttaatagtaagtaccttgattcatatggatggatggaatggtagagagttaaaacg 3392
Query: 426 aaaatagattaagtttttgtttattgtaataaaaaccctagactagaaaatacagaaatg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3393 aaaatagattaagtttttgtttattgtaataaaaaccctagactagaaaatacagaaatg 3452
Query: 486 atggaatgcatttatcctctttcagacaattggtgattggatataatttagttttctgga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3453 atggaatgcatttatcctctttcagacaattggtgattggatataatttagttttctgga 3512
Query: 546 atttcaatttcaccagcgttgatagcttcgatgatgtcgtgtgggttcttgtagttaaca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3513 atttcaatttcaccagcgttgatagcttcgatgatgtcgtgtgggttcttgtagttaaca 3572
Query: 606 cgacaaccgacggattgagcagtacccaagatttccttggtgacagaagccaagttctta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3573 cgacaaccgacggattgagcagtacccaagatttccttggtgacagaagccaagttctta 3632
Query: 666 ccgaaagacttttctctcatttgcttagcaacttcgatgatgtcttccaattgcaagtta 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3633 ccgaaagacttttctctcatttgcttagcaacttcgatgatgtcttccaattgcaagtta 3692
Query: 726 ccactgtgtttgacgttcttgtccttctttctgtctcttggtggttccttcaaagcggtg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3693 ccactgtgtttgacgttcttgtccttctttctgtctcttggtggttccttcaaagcggtg 3752
Query: 786 ataaccaaagaggaagcggatggaacaacagaagcagtagcttgtctgttttggatcttc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3753 ataaccaaagaggaagcggatggaacaacagaagcagtagcttgtctgttttggatcttc 3812
Query: 846 aattgaacagtaa-cytgata-ccttgaaat-cttggtggc 883
||||||||||||| | ||||| ||||||||| |||||||||
Sbjct: 3813 aattgaacagtaaccttgatacccttgaaatccttggtggc 3853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8383
Number of Sequences: 1807
Number of extensions: 8383
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)